Source code for bokeh.models.graphs

from ..core.has_props import abstract
from ..core.properties import Any, Dict, Either, Int, Seq, String
from ..model import Model
from ..models.sources import ColumnDataSource


[docs]@abstract
class LayoutProvider(Model):
    '''

    '''

    pass


[docs]class StaticLayoutProvider(LayoutProvider):
    '''

    '''

    graph_layout = Dict(Either(String, Int), Seq(Any), default={}, help="""
    The coordinates of the graph nodes in cartesian space. The dictionary
    keys correspond to a node index and the values are a two element sequence
    containing the x and y coordinates of the node.

    .. code-block:: python

        {
            0 : [0.5, 0.5],
            1 : [1.0, 0.86],
            2 : [0.86, 1],
        }
    """)

[docs]def from_networkx(graph, layout_function, **kwargs):
        '''
        Generate a GraphRenderer from a networkx.Graph object and networkx
        layout function. Any keyword arguments will be passed to the
        layout function.

        Args:
            graph (networkx.Graph) : a networkx graph to render
            layout_function (function) : a networkx layout function

        Returns:
            instance (GraphRenderer)

        .. warning::
            Only two dimensional layouts are currently supported.

        '''

        # inline import to prevent circular imports
        from ..models.renderers import GraphRenderer
        from ..models.graphs import StaticLayoutProvider

        # Handles nx 1.x vs 2.x data structure change
        nodes = list(graph.nodes())
        edges = list(graph.edges())

        edges_start = [edge[0] for edge in edges]
        edges_end = [edge[1] for edge in edges]

        node_source = ColumnDataSource(data=dict(index=nodes))
        edge_source = ColumnDataSource(data=dict(
            start=edges_start,
            end=edges_end
        ))

        graph_renderer = GraphRenderer()
        graph_renderer.node_renderer.data_source.data = node_source.data
        graph_renderer.edge_renderer.data_source.data = edge_source.data

        graph_layout = layout_function(graph, **kwargs)
        graph_renderer.layout_provider = StaticLayoutProvider(graph_layout=graph_layout)

        return graph_renderer


[docs]@abstract
class GraphHitTestPolicy(Model):
    '''

    '''

    pass


[docs]class NodesOnly(GraphHitTestPolicy):
    '''
    With the NodesOnly policy, only graph nodes are able to be selected and
    inspected. There is no selection or inspection of graph edges.

    '''

    pass

[docs]class NodesAndLinkedEdges(GraphHitTestPolicy):
    '''
    With the NodesAndLinkedEdges policy, inspection or selection of graph
    nodes will result in the inspection or selection of the node and of the
    linked graph edges. There is no direct selection or inspection of graph
    edges.

    '''

    pass

[docs]class EdgesAndLinkedNodes(GraphHitTestPolicy):
    '''
    With the EdgesAndLinkedNodes policy, inspection or selection of graph
    edges will result in the inspection or selection of the edge and of the
    linked graph nodes. There is no direct selection or inspection of graph
    nodes.

    '''

    pass